Bioinformatics | Genome Engineering | Data & Analytics
Bridging the gap between complex genomics and scalable software. Expert in multi-omics analysis, CRISPR engineering, and building high-performance open-source tools for translational medicine.
Computational Biology
RNA-Seq , Ribo-Seq (Translatomics), Single-Cell & Spatial Transcriptomics concepts, Genomics , Proteomics concepts.
Illumina (NGS), Oxford Nanopore & PacBio (Long-Read).
Genome Engineering ( CRISPR Design & Off-Target Analysis), Gene Regulation , RNA Biology (Translation, Modifications, Splicing), Variant Analysis .
Therapeutic Target Identification, Biomarker Discovery , Precision Medicine, Computational Drug Discovery.
Software, AI & Visualization
R (Bioconductor, tidyverse, Shiny), Python (Pandas, SciPy, scikit-learn, Keras, TensorFlow/PyTorch), Julia , Javascript (Node.js, React, Angular), Bash .
Predictive Modeling , Deep Learning , Model Development & Validation for biological applications.
Interactive Dashboards & Graphics ( D3.js , ggplot2 , Plotly , Shiny), UI/UX principles.
Creator of widely used bioinformatics tools ( ORFik , ampliCan , RareVariantVis , CHOPCHOP , tailfindR , riboCrypt , CHOPOFF ).
Data Engineering & DevOps
SQL (PostgreSQL, MySQL), NoSQL (MongoDB, Redis, Neo4j).
High-Performance Computing ( HPC ), Cloud Platforms ( Azure , GCP ), Docker , Kubernetes .
End-to-end pipeline development, CI/CD , version control ( Git ), reproducible research.
Polish (native), English (fluent), Norwegian (basic)
An integrated community platform for genome engineering designed to foster scientific collaboration and share resources.
Automated analysis of CRISPR experiments using NGS data. Produces comprehensive HTML reports.
Design HDR templates to fix genetic variants or create disease models.
A comprehensive R toolkit for the analysis of translation (Ribo-Seq, RNA-Seq). Optimized for extreme speed.
Design spacers and primers for sensitive detection of Single-Nucleotide Variant on RNA with our Dual Cas13a strategy.
LLM context management for large codebases.
A CRISPR off-target detection tool achieving 10x speed improvement and 100% sensitivity.
One of the most widely used web tools for CRISPR genome engineering. Cited over 2500 times.
Algorithmic team composition builder for League of Legends to maximize win probability.
A comprehensive tabletop RPG rulebook extending the Fate Core system for the Hunter x Hunter universe.
Website and curriculum for teaching R programming to biologists and beginners.
